Public Datasets/Resources

Compiled Genome-Wide Data-Sets (PLINK binary PED formats):
1) Global Dataset - 27,022 SNPs, 2,732 individuals from 172 uniquely entered populations from around the World, 99.76% genotyping rate. See this post and this post for more details and analysis.

2) African Dataset - 26,129 SNPs, 1,065 individuals from 45 uniquely entered populations from Africa, 99.46% genotyping rate. See this post for more details and analysis.

3) 
-->Global Dataset (V2) – 16,595 SNPs, 2,967 individuals from 184 uniquely entered populations from around the World, 99.59% genotyping rate. See this post for more details and analysis.

4) 
-->African Dataset (V2) - 26,129 SNPs, 895 individuals from 57 uniquely entered populations from Africa, 92.77% genotyping rate. See this post for more details and analysis.


Primary resources for genome wide datasets (various formats):
Behar (2010) 
Hapmap III 
Henn (2011) 
HGDP 
Xing (2010) 
Estonian Biocenter

Y DNA and STR resources:

ISOGG 2012






mtDNA resources:

PhyloTree.org - mtDNA tree Build 14 (5 Apr 2012)